Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system atpase subunit | BCL90_1063 | Not Available | Positive | 1231327 - 1232226 | 32915.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1231730 - 1231809 | Not Available |
| peptidase m1-like protein | BCL90_1064 | Not Available | Positive | 1232223 - 1235741 | 134216.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1234897 - 1234965 | Not Available |
| arac-like dna-binding protein | BCL90_1065 | Not Available | Negative | 1235847 - 1236788 | 36313.8 |
| rnd family efflux transporter mfp subunit | BCL90_1066 | Not Available | Negative | 1236815 - 1237915 | 39490.8 |
| multidrug efflux pump subunit acrb | BCL90_1067 | Not Available | Negative | 1237929 - 1241213 | 119438.0 |
| outer membrane protein tolc | BCL90_1068 | Not Available | Negative | 1241227 - 1242618 | 51335.9 |
| activator of hsp90 atpase-like protein | BCL90_1069 | Not Available | Negative | 1243480 - 1243872 | 14745.0 |
| hypothetical protein | BCL90_1070 | Not Available | Negative | 1244097 - 1244615 | 18643.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
