Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1045 | Not Available | + | 1215921 - 1216415 | 18691.7 |
| dinb family protein | BCL90_1046 | Not Available | + | 1216419 - 1216931 | 19442.1 |
| hypothetical protein | BCL90_1047 | Not Available | + | 1216940 - 1217347 | 15703.7 |
| doxx-like protein | BCL90_1048 | Not Available | + | 1217964 - 1218341 | 13882.0 |
| uncharacterized protein duf2147 | BCL90_1049 | Not Available | + | 1218442 - 1218873 | 16244.7 |
| photosystem ii stability/assembly factor-like uncharacterized protein | BCL90_1050 | Not Available | + | 1218880 - 1219896 | 36704.6 |
| ykoy family integral membrane protein | BCL90_1051 | Not Available | + | 1220236 - 1221051 | 30509.8 |
| Ncrna_class:other | Not Available | Not Available | + | 1220958 - 1221038 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 1221082 - 1221160 | Not Available |
| putative hydrolase of the had superfamily | BCL90_1052 | Not Available | + | 1221148 - 1221852 | 26920.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
