Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vit1/ccc1 family predicted fe2+/mn2+ transporter | BCL90_1018 | Not Available | + | 1190516 - 1191208 | 24923.3 |
| rieske fe-s protein | BCL90_1019 | Not Available | + | 1191500 - 1191925 | 14793.4 |
| thioredoxin-like protein | BCL90_1020 | Not Available | + | 1191931 - 1192359 | 16281.7 |
| thiamine biosynthesis lipoprotein | BCL90_1021 | Not Available | + | 1192366 - 1193298 | 33606.5 |
| Ncrna_class:other | Not Available | Not Available | + | 1193204 - 1193290 | Not Available |
| uncharacterized protein duf4266 | BCL90_1022 | Not Available | + | 1193301 - 1193531 | 7976.58 |
| uncharacterized protein duf3570 | BCL90_1023 | Not Available | + | 1193544 - 1194755 | 46117.0 |
| hypothetical protein | BCL90_1024 | Not Available | - | 1194940 - 1196136 | 45871.4 |
| drug/metabolite transporter (dmt)-like permease | BCL90_1025 | Not Available | - | 1196179 - 1197081 | 33346.9 |
| spermine/spermidine n-acetyltransferase | BCL90_1026 | Not Available | - | 1197081 - 1197626 | 21020.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
