Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like peptidase | BCL90_0973 | Not Available | Positive | 1130619 - 1131590 | 36396.7 |
| hypothetical protein | BCL90_0974 | Not Available | Positive | 1131590 - 1132372 | 29544.3 |
| sir2-like protein | BCL90_0975 | Not Available | Positive | 1132315 - 1133646 | 51102.1 |
| hypothetical protein | BCL90_0976 | Not Available | Positive | 1133646 - 1136603 | 114043.0 |
| alpha/beta hydrolase family protein duf900 | BCL90_0977 | Not Available | Positive | 1136825 - 1138282 | 53933.4 |
| putative caspase-like protein | BCL90_0978 | Not Available | Positive | 1138288 - 1139076 | 29461.3 |
| hypothetical protein | BCL90_0979 | Not Available | Positive | 1139088 - 1140728 | 61894.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1140133 - 1140200 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 1140299 - 1140350 | Not Available |
| hypothetical protein | BCL90_0981 | Not Available | Positive | 1141725 - 1142858 | 42841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
