Flavobacterium endophyticum strain DSM 29537

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium endophyticum strain DSM 29537 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain contains a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation. The accession number for genetic data related to this strain is RBLC00000000.1, which provides a reference for further genomic studies. Flavobacterium endophyticum belongs to a group of bacteria that are often associated with plant endophytes, suggesting a potential ecological role in plant health and growth promotion. The presence of flagella may enhance its ability to colonize plant tissues, allowing it to establish beneficial relationships with host plants. The rod shape is also a common feature among many bacteria, enabling effective nutrient absorption and interaction with the surrounding environment. This strain’s endophytic nature could contribute to biocontrol mechanisms against plant pathogens or promote nutrient cycling within ecosystems. The study of Flavobacterium endophyticum DSM 29537 may provide insights into its interactions within plant systems and its potential applications in agriculture, particularly in fostering sustainable practices. Understanding its ecological role could lead to advancements in biotechnological applications aimed at enhancing plant resilience and productivity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium endophyticum
Strainstrain DSM 29537

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium endophyticum strain DSM 29537
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium endophyticum strain DSM 29537 Ga0181031_111, whole

Gene Summary

Adenine Count

1147150 bp

Thymine Count

1133202 bp

Guanine Count

716325 bp

Cytosine Count

748232 bp

Genome Length

3746681 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseCLV94_3379Not AvailableNegative3680641 - 368138427990.7
tetratricopeptide repeat proteinCLV94_3380Not AvailableNegative3681459 - 368284754873.0
acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferaseCLV94_3381Not AvailableNegative3682982 - 368417543857.3
osta-like proteinCLV94_3382Not AvailableNegative3684240 - 368592564824.3
adenylosuccinate synthaseCLV94_3383Not AvailableNegative3686001 - 368727246781.4
fur family ferric uptake transcriptional regulatorCLV94_3384Not AvailableNegative3687294 - 368776718792.3
gtp pyrophosphokinaseCLV94_3385Not AvailableNegative3687920 - 369013984047.2
cubico group peptidase (beta-lactamase class c family)CLV94_3386Not AvailableNegative3690282 - 369180557478.0
trmh family rna methyltransferaseCLV94_3387Not AvailableNegative3691826 - 369261128517.2
uncharacterized protein (duf58 family)CLV94_3388Not AvailableNegative3692684 - 369401551553.2

Displaying genes 3361 – 3370 of 3405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.