Flavobacterium endophyticum strain DSM 29537

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium endophyticum strain DSM 29537 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain contains a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation. The accession number for genetic data related to this strain is RBLC00000000.1, which provides a reference for further genomic studies. Flavobacterium endophyticum belongs to a group of bacteria that are often associated with plant endophytes, suggesting a potential ecological role in plant health and growth promotion. The presence of flagella may enhance its ability to colonize plant tissues, allowing it to establish beneficial relationships with host plants. The rod shape is also a common feature among many bacteria, enabling effective nutrient absorption and interaction with the surrounding environment. This strain’s endophytic nature could contribute to biocontrol mechanisms against plant pathogens or promote nutrient cycling within ecosystems. The study of Flavobacterium endophyticum DSM 29537 may provide insights into its interactions within plant systems and its potential applications in agriculture, particularly in fostering sustainable practices. Understanding its ecological role could lead to advancements in biotechnological applications aimed at enhancing plant resilience and productivity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium endophyticum
Strainstrain DSM 29537

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium endophyticum strain DSM 29537
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium endophyticum strain DSM 29537 Ga0181031_111, whole

Gene Summary

Adenine Count

1147150 bp

Thymine Count

1133202 bp

Guanine Count

716325 bp

Cytosine Count

748232 bp

Genome Length

3746681 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmcCLV94_0108Not AvailableNegative102889 - 10355425273.5
hypothetical proteinCLV94_0109Not AvailableNegative103554 - 10400617256.0
uncharacterized protein duf4920CLV94_0110Not AvailableNegative104006 - 10463823225.8
branched-chain amino acid aminotransferaseCLV94_0111Not AvailablePositive104927 - 10599439962.8
hypothetical proteinCLV94_0112Not AvailablePositive106017 - 1061846340.14
putative had superfamily cof-like phosphohydrolaseCLV94_0113Not AvailableNegative106223 - 10660614527.4
hypothetical proteinCLV94_0114Not AvailablePositive106687 - 1068757358.45
dipeptidyl-peptidase-3CLV94_0115Not AvailableNegative106927 - 10896077043.0
integron-associated effector binding proteinCLV94_0116Not AvailablePositive109103 - 11024542000.8
rna polymerase sigma-70 factor (ecf subfamily)CLV94_0117Not AvailablePositive110368 - 11091021042.3

Displaying genes 111 – 120 of 3405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.