Tenacibaculum lutimaris strain DSM 16505

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum lutimaris strain DSM 16505 is a Gram-negative, motile rod-shaped bacterium. This strain is classified as mesophilic, with an optimal growth temperature of 32°C. It possesses a single replicon, which is an essential feature for its genetic structure and replication. The Gram-negative nature of T. lutimaris indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in various environments. The motility of this strain suggests that it can actively move towards favorable conditions or away from adverse ones, enhancing its survival and ecological interactions. The temperature range of mesophilic organisms like T. lutimaris typically spans from approximately 20°C to 45°C, allowing it to thrive in environments that experience moderate temperatures. This adaptability is significant for its potential role in aquatic ecosystems, where temperature fluctuations can occur. The accession number for T. lutimaris strain DSM 16505 is RAQM00000000.1, which provides a reference for genetic and taxonomic studies. Given its traits, T. lutimaris may play a critical role in the microbial dynamics of marine environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding its specific ecological roles could inform research on microbial diversity and functionality in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum lutimaris
Strainstrain DSM 16505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum lutimaris strain DSM 16505 Ga0196852_109, whole

Gene Summary

Adenine Count

973788 bp

Thymine Count

979995 bp

Guanine Count

448029 bp

Cytosine Count

467038 bp

Genome Length

2869467 bp

Protein-coding Genes

2640 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhodanese-related sulfurtransferaseC8N26_0242Not AvailableNegative271236 - 27161614271.3
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)C8N26_0243Not AvailableNegative271622 - 27303151132.7
sulp family sulfate permeaseC8N26_0244Not AvailableNegative273044 - 27477463994.6
holliday junction dna helicase subunit ruvbC8N26_0245Not AvailableNegative274778 - 27580037659.2
cytochrome c oxidase subunit 1C8N26_0246Not AvailableNegative275954 - 27772365575.7
cytochrome c oxidase subunit 2C8N26_0247Not AvailableNegative277751 - 27875838694.9
quinol:cytochrome c oxidoreductase quinone-binding subunit 2C8N26_0248Not AvailableNegative278794 - 28036559230.0
quinol:cytochrome c oxidoreductase monoheme cytochrome subunitC8N26_0249Not AvailableNegative280388 - 28093620120.1
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive281366 - 281464Not Available
quinol:cytochrome c oxidoreductase membrane proteinC8N26_0250Not AvailableNegative280946 - 28147319836.0

Displaying genes 231 – 240 of 2691 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.