Tenacibaculum soleae str. UCD-KL19

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum soleae strain UCD-KL19 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and requires aerobic conditions for growth. This microbe is part of the Tenacibaculum genus, which is known for its association with marine environments. The Gram-negative nature of T. soleae indicates a distinct cellular structure characterized by a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interaction with the surrounding environment. The optimal growth temperature of 25.0°C suggests that T. soleae is well adapted to temperate marine conditions, potentially making it a significant player in the microbial communities of coastal waters. The aerobic requirement implies that this bacterium may engage in metabolic processes that depend on oxygen, which could be critical for its survival and function in its ecological niche. Understanding the traits of Tenacibaculum soleae str. UCD-KL19 contributes to a broader comprehension of marine microbiomes, particularly in how such organisms adapt to their environments and participate in biogeochemical cycles. This strain may offer insights into the complex interactions that occur within marine ecosystems, highlighting its potential role in nutrient cycling and organic matter decomposition in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum soleae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum soleae str. UCD-KL19

Accession NumberMAKX00000000.1

Gene Summary

Adenine Count

1048888 bp

Thymine Count

1048475 bp

Guanine Count

463190 bp

Cytosine Count

446391 bp

Genome Length

3006997 bp

Protein-coding Genes

2693 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinBA195_06645Not Available-1409726 - 141040325671.6
hypothetical proteinBA195_06650Not Available+1410566 - 14108179257.57
hypothetical proteinBA195_06655Not Available+1410801 - 141112112094.1
hypothetical proteinBA195_06660Not Available+1411111 - 14113238116.14
hypothetical proteinBA195_06665Not Available+1411316 - 141162411988.5
hypothetical proteinBA195_06670Not Available+1411605 - 14117846860.55
Hypothetical proteinBA195_06675Not Available+1411934 - 141288136955.4
hypothetical proteinBA195_06680Not Available+1412871 - 141337719693.5
Hypothetical proteinBA195_06685Not Available+1413377 - 141420130745.8
hypothetical proteinBA195_06690Not Available+1414189 - 14144288941.98

Displaying genes 1 – 10 of 2781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

170 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 170 metabolites