Tenacibaculum lutimaris strain DSM 16505

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum lutimaris strain DSM 16505 is a Gram-negative, motile rod-shaped bacterium. This strain is classified as mesophilic, with an optimal growth temperature of 32°C. It possesses a single replicon, which is an essential feature for its genetic structure and replication. The Gram-negative nature of T. lutimaris indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in various environments. The motility of this strain suggests that it can actively move towards favorable conditions or away from adverse ones, enhancing its survival and ecological interactions. The temperature range of mesophilic organisms like T. lutimaris typically spans from approximately 20°C to 45°C, allowing it to thrive in environments that experience moderate temperatures. This adaptability is significant for its potential role in aquatic ecosystems, where temperature fluctuations can occur. The accession number for T. lutimaris strain DSM 16505 is RAQM00000000.1, which provides a reference for genetic and taxonomic studies. Given its traits, T. lutimaris may play a critical role in the microbial dynamics of marine environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding its specific ecological roles could inform research on microbial diversity and functionality in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum lutimaris
Strainstrain DSM 16505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum lutimaris strain DSM 16505 Ga0196852_109, whole

Gene Summary

Adenine Count

973788 bp

Thymine Count

979995 bp

Guanine Count

448029 bp

Cytosine Count

467038 bp

Genome Length

2869467 bp

Protein-coding Genes

2640 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligaseC8N26_2221Not AvailableNegative2358010 - 235922143873.9
rna polymerase rpb6C8N26_2222Not AvailableNegative2359223 - 235954312387.5
beta-barrel assembly machine subunit bamdC8N26_2223Not AvailableNegative2359547 - 236036832035.3
ferritinC8N26_2224Not AvailableNegative2360493 - 236100819525.2
4-hydroxy-tetrahydrodipicolinate synthaseC8N26_2225Not AvailableNegative2361109 - 236198431845.4
hypothetical proteinC8N26_2226Not AvailableNegative2361984 - 236249619389.3
hypothetical proteinC8N26_2227Not AvailableNegative2362525 - 236359839965.5
doxx-like proteinC8N26_2228Not AvailablePositive2363674 - 236406314249.3
putative transcriptional regulator ydeeC8N26_2229Not AvailableNegative2364106 - 236456417197.0
hth domain-containing proteinC8N26_2230Not AvailableNegative2364614 - 236532127267.0

Displaying genes 2191 – 2200 of 2691 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.