Tenacibaculum lutimaris strain DSM 16505

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum lutimaris strain DSM 16505 is a Gram-negative, motile rod-shaped bacterium. This strain is classified as mesophilic, with an optimal growth temperature of 32°C. It possesses a single replicon, which is an essential feature for its genetic structure and replication. The Gram-negative nature of T. lutimaris indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in various environments. The motility of this strain suggests that it can actively move towards favorable conditions or away from adverse ones, enhancing its survival and ecological interactions. The temperature range of mesophilic organisms like T. lutimaris typically spans from approximately 20°C to 45°C, allowing it to thrive in environments that experience moderate temperatures. This adaptability is significant for its potential role in aquatic ecosystems, where temperature fluctuations can occur. The accession number for T. lutimaris strain DSM 16505 is RAQM00000000.1, which provides a reference for genetic and taxonomic studies. Given its traits, T. lutimaris may play a critical role in the microbial dynamics of marine environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding its specific ecological roles could inform research on microbial diversity and functionality in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum lutimaris
Strainstrain DSM 16505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum lutimaris strain DSM 16505 Ga0196852_109, whole

Gene Summary

Adenine Count

973788 bp

Thymine Count

979995 bp

Guanine Count

448029 bp

Cytosine Count

467038 bp

Genome Length

2869467 bp

Protein-coding Genes

2640 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-glyNot AvailableNot AvailablePositive2170158 - 2170233Not Available
Trna-glyNot AvailableNot AvailablePositive2170279 - 2170354Not Available
rhomboid family proteinC8N26_2042Not AvailableNegative2170401 - 217107224961.2
kdo2-lipid iv(a) lauroyltransferaseC8N26_2043Not AvailablePositive2171141 - 217205235935.9
Trna-hisNot AvailableNot AvailablePositive2172135 - 2172210Not Available
bacillithiol biosynthesis deacetylase bshb1C8N26_2045Not AvailableNegative2172267 - 217298326593.8
putative mate family efflux proteinC8N26_2046Not AvailableNegative2173059 - 217446850479.2
putative short-subunit dehydrogenase-like oxidoreductase (duf2520 family)C8N26_2047Not AvailablePositive2174621 - 217537928145.8
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)C8N26_2048Not AvailablePositive2175363 - 217589019610.4
uncharacterized protein (duf2147 family)C8N26_2049Not AvailablePositive2175936 - 217636116037.3

Displaying genes 2011 – 2020 of 2691 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.