Tenacibaculum lutimaris strain DSM 16505

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum lutimaris strain DSM 16505 is a Gram-negative, motile rod-shaped bacterium. This strain is classified as mesophilic, with an optimal growth temperature of 32°C. It possesses a single replicon, which is an essential feature for its genetic structure and replication. The Gram-negative nature of T. lutimaris indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in various environments. The motility of this strain suggests that it can actively move towards favorable conditions or away from adverse ones, enhancing its survival and ecological interactions. The temperature range of mesophilic organisms like T. lutimaris typically spans from approximately 20°C to 45°C, allowing it to thrive in environments that experience moderate temperatures. This adaptability is significant for its potential role in aquatic ecosystems, where temperature fluctuations can occur. The accession number for T. lutimaris strain DSM 16505 is RAQM00000000.1, which provides a reference for genetic and taxonomic studies. Given its traits, T. lutimaris may play a critical role in the microbial dynamics of marine environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding its specific ecological roles could inform research on microbial diversity and functionality in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum lutimaris
Strainstrain DSM 16505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum lutimaris strain DSM 16505 Ga0196852_109, whole

Gene Summary

Adenine Count

973788 bp

Thymine Count

979995 bp

Guanine Count

448029 bp

Cytosine Count

467038 bp

Genome Length

2869467 bp

Protein-coding Genes

2640 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
saccharopine dehydrogenase-like nadp-dependent oxidoreductaseC8N26_1035Not AvailableNegative1076639 - 107800951812.1
uncharacterized membrane protein ygdd (tmem256/duf423 family)C8N26_1036Not AvailablePositive1078090 - 107847014165.9
phosphoenolpyruvate carboxykinase (atp)C8N26_1037Not AvailablePositive1078557 - 108016459471.1
adenine deaminaseC8N26_1038Not AvailablePositive1080244 - 108186659633.6
holliday junction endonuclease ruvcC8N26_1039Not AvailablePositive1081875 - 108242620140.1
oxygen-independent coproporphyrinogen-3 oxidaseC8N26_1040Not AvailablePositive1082428 - 108358844359.0
kynurenine formamidaseC8N26_1041Not AvailablePositive1083601 - 108435028492.1
putative mfs family arabinose efflux permeaseC8N26_1042Not AvailablePositive1084588 - 108584447197.0
ntp pyrophosphatase (non-canonical ntp hydrolase)C8N26_1043Not AvailablePositive1085913 - 108623912598.8
hypothetical proteinC8N26_1044Not AvailablePositive1086240 - 10864889460.92

Displaying genes 1021 – 1030 of 2691 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.