Citrobacter gillenii strain MBT-C3

Gram-negativeRodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter gillenii strain MBT-C3 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and the presence of flagella. This motility feature suggests that the strain is capable of movement in its environment, which may have implications for its ecological interactions and colonization abilities. The strain is noted to possess a single replicon, indicating a relatively straightforward genomic organization that could influence its genetic stability and replication processes. The accession number for the genomic data of Citrobacter gillenii strain MBT-C3 is QVEK00000000.1, which serves as a reference for further study and characterization of its genetic and phenotypic attributes. In terms of ecological insight, the aerobic nature of Citrobacter gillenii strain MBT-C3 points to its potential habitats in oxygen-rich environments. This trait may position the strain as a contributor to various biogeochemical cycles, particularly in soil and water systems where aerobic processes play a critical role. Understanding the specific ecological niches and interactions of this strain could shed light on its role in microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter gillenii
Strainstrain MBT-C3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter gillenii strain MBT-C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter gillenii strain MBT-C3 NODE_37_length_624_cov_28.4004,

Gene Summary

Adenine Count

1223512 bp

Thymine Count

1229032 bp

Guanine Count

1368927 bp

Cytosine Count

1344433 bp

Genome Length

5167205 bp

Protein-coding Genes

4592 genes

Non-Coding Genes

388 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murr/rpir family transcriptional regulatorDZA29_12880Not AvailablePositive2614122 - 261498832494.7
d-alanyl-d-alanine dipeptidaseDZA29_12885Not AvailablePositive2615003 - 261559021422.6
abc transporter substrate-binding proteinDZA29_12890Not AvailablePositive2615607 - 261716957423.2
abc transporter permeaseDZA29_12895Not AvailablePositive2617218 - 261824037504.5
d,d-dipeptide abc transporter permeaseDZA29_12900Not AvailablePositive2618237 - 261913332021.9
abc transporter atp-binding proteinDZA29_12905Not AvailablePositive2619130 - 262011636119.9
atp-binding cassette domain-containing proteinDZA29_12910Not AvailablePositive2620109 - 262104734809.4
lysr family transcriptional regulatorDZA29_12915Not AvailableNegative2621075 - 262196532546.9
coa transferase subunit aDZA29_12920Not AvailablePositive2622108 - 262281525368.6
coa transferase subunit bDZA29_12925Not AvailablePositive2622818 - 262347423187.4

Displaying genes 2791 – 2800 of 4980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.