Agathobacter rectalis strain OM08-12AT

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain OM08-12AT is a Gram-positive, nonsporulating rod-shaped bacterium that is classified as a chemoheterotroph. It thrives optimally at a temperature of 37.0°C and requires anaerobic conditions for growth. This strain exhibits metabolic versatility, utilizing a range of organic compounds as energy sources, which is indicative of its adaptation to diverse habitats. The anaerobic nature of A. rectalis strain OM08-12AT suggests that it plays a significant role in environments where oxygen is limited, such as the gastrointestinal tracts of various organisms. Its ability to thrive in multiple habitats underscores its ecological significance, potentially contributing to the maintenance of microbial communities in anaerobic environments. The traits of this strain highlight its potential role in biochemical processes, such as fermentation, within anaerobic ecosystems. Understanding the specific metabolic pathways and interactions of A. rectalis strain OM08-12AT could provide insights into its contribution to nutrient cycling and overall microbial diversity in these habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain OM08-12AT
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain OM08-12AT

Accession NumberQSTI00000000.1

Gene Summary

Adenine Count

982441 bp

Thymine Count

987568 bp

Guanine Count

675635 bp

Cytosine Count

704305 bp

Genome Length

3350682 bp

Protein-coding Genes

3073 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinDXC13_00005Not Available-91 - 2978136.56
sodium/glutamate symporterDXC13_00010Not Available-315 - 150242451.5
5s ribosomal rnaNot AvailableNot Available+1787 - 1904Not Available
23s ribosomal rnaNot AvailableNot Available+2364 - 5249Not Available
c4-dicarboxylate abc transporter substrate-binding proteinDXC13_00015Not Available-1594 - 252033293.3
undecaprenyl-diphosphate phosphataseDXC13_00020Not Available+2692 - 356131908.4
transcription elongation factor greaDXC13_00025Not Available+3602 - 410519281.7
transcriptional regulatorDXC13_00030Not Available+4200 - 541746434.4
signal peptidase iDXC13_00035Not Available+5442 - 592117452.6
srtb family sortaseDXC13_00040Not Available+5914 - 668429751.3

Displaying genes 1 – 10 of 3138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites