Agathobacter rectalis strain OM08-12AT

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain OM08-12AT is a Gram-positive, non-motile anaerobic bacterium characterized by its rod shape. It is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, which is typical for many gut-associated microbes. This strain is mesophilic, with an optimal growth temperature of 37°C, making it well-suited for survival in the human body, as it has been identified among the microbiota of Homo sapiens. The strain has a single replicon and a single membrane, which is consistent with many members of its genus. Notably, Agathobacter rectalis strain OM08-12AT does not form spores, suggesting a strategy for persistence that relies on other mechanisms rather than sporulation. In terms of ecological significance, the presence of Agathobacter rectalis in the human gut microbiota contributes to the complex community of microorganisms that play crucial roles in digestion, metabolism, and immune system modulation. As a free-living organism, it interacts with the human host and other microbial species, potentially influencing gut health and disease states. Understanding the traits of Agathobacter rectalis strain OM08-12AT can provide insights into its role in maintaining gut homeostasis and its potential implications in human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain OM08-12AT

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain OM08-12AT
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain OM08-12AT OM08-12AT.Scaf127, whole

Gene Summary

Adenine Count

982441 bp

Thymine Count

987568 bp

Guanine Count

675635 bp

Cytosine Count

704305 bp

Genome Length

3350682 bp

Protein-coding Genes

3073 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDXC13_04375Not AvailablePositive950716 - 95102111428.9
hypothetical proteinDXC13_04380Not AvailablePositive951176 - 95158315378.2
terpene synthaseDXC13_04385Not AvailablePositive951577 - 9517988129.33
xre family transcriptional regulatorDXC13_04390Not AvailablePositive951788 - 95210811935.5
resolvaseDXC13_04395Not AvailablePositive952119 - 95249014043.3
type ii toxin-antitoxin system pemk/mazf family toxinDXC13_04400Not AvailablePositive952493 - 95293015983.2
transcriptional regulatorDXC13_04405Not AvailablePositive952914 - 9531268310.97
copg family transcriptional regulatorDXC13_04410Not AvailablePositive953261 - 9534376851.32
site-specific integraseDXC13_04415Not AvailablePositive953470 - 95470548171.6
methionine--trna ligase subunit betaDXC13_04420Not AvailablePositive954982 - 95545217333.8

Displaying genes 841 – 850 of 3138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.