Agathobacter rectalis strain OM08-12AT

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain OM08-12AT is a Gram-positive, non-motile anaerobic bacterium characterized by its rod shape. It is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, which is typical for many gut-associated microbes. This strain is mesophilic, with an optimal growth temperature of 37°C, making it well-suited for survival in the human body, as it has been identified among the microbiota of Homo sapiens. The strain has a single replicon and a single membrane, which is consistent with many members of its genus. Notably, Agathobacter rectalis strain OM08-12AT does not form spores, suggesting a strategy for persistence that relies on other mechanisms rather than sporulation. In terms of ecological significance, the presence of Agathobacter rectalis in the human gut microbiota contributes to the complex community of microorganisms that play crucial roles in digestion, metabolism, and immune system modulation. As a free-living organism, it interacts with the human host and other microbial species, potentially influencing gut health and disease states. Understanding the traits of Agathobacter rectalis strain OM08-12AT can provide insights into its role in maintaining gut homeostasis and its potential implications in human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain OM08-12AT

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain OM08-12AT
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain OM08-12AT OM08-12AT.Scaf127, whole

Gene Summary

Adenine Count

982441 bp

Thymine Count

987568 bp

Guanine Count

675635 bp

Cytosine Count

704305 bp

Genome Length

3350682 bp

Protein-coding Genes

3073 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinDXC13_03790Not AvailablePositive842033 - 84277027977.6
diaminopimelate decarboxylaseDXC13_03795Not AvailableNegative842775 - 84404347054.0
lytic transglycosylase domain-containing proteinDXC13_03800Not AvailablePositive844233 - 84499126610.2
Trna-thrNot AvailableNot AvailablePositive845085 - 845156Not Available
metallophosphoesteraseDXC13_03810Not AvailableNegative845504 - 84609422966.6
bmp family abc transporter substrate-binding proteinDXC13_03815Not AvailableNegative846094 - 84800172581.1
flagellar motor switch proteinDXC13_03820Not AvailablePositive848132 - 84871020914.4
response regulatorDXC13_03825Not AvailablePositive848715 - 84907412861.8
adaptor protein mecaDXC13_03830Not AvailableNegative849153 - 84980924777.6
sigma-70 family rna polymerase sigma factorDXC13_03835Not AvailableNegative849822 - 85043023585.0

Displaying genes 741 – 750 of 3138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.