Ligilactobacillus ruminis strain TF10-9AT

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Ligilactobacillus ruminis strain TF10-9AT is a Gram-positive, rod-shaped bacterium that resides in the human gut and exhibits facultative anaerobic characteristics. This strain is part of the Lactobacillus genus, which is well-known for its role in fermentation and its presence in various human microbiomes. As a facultative anaerobe, L. ruminis TF10-9AT can thrive in both oxygen-rich and oxygen-poor environments, allowing it to adapt to the dynamic conditions of the gut microbiota. The presence of Ligilactobacillus ruminis strain TF10-9AT in the human gut suggests potential contributions to gut health, as members of this genus are often associated with beneficial effects on digestion and the maintenance of a balanced microbiome. This strain may play a role in the fermentation of dietary components, producing metabolites that can influence host physiology. Additionally, the ecological niche occupied by L. ruminis TF10-9AT highlights its potential interactions with other microbial species within the gut. By adapting to varying oxygen levels, this strain may contribute to metabolic processes that support the overall microbial community, thereby influencing gut homeostasis and possibly affecting host health outcomes. Further research could elucidate the specific functional roles of this strain within the complex ecosystem of the human gut microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ligilactobacillus ruminis strain TF10-9AT

Accession NumberQSQR00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1151830 - 1151841Not Available
Hypothetical proteinDXD09_06045Not Available-1159339 - 11595187201.58
EndolysinDXD09_06050Not Available-1160068 - 116133646299.1
HolinDXD09_06055Not Available-1161326 - 11615628193.31
hypothetical proteinDXD09_06060Not Available-1161555 - 11617738382.04
Hypothetical proteinDXD09_06065Not Available-1161901 - 11620415385.57
Orf044DXD09_06070Not Available-1162034 - 116240213341.5
hypothetical proteinDXD09_06075Not Available-1162414 - 116286916878.2
Hypothetical proteinDXD09_06080Not Available+1162952 - 116327810462.0
Tail fiber-like proteinDXD09_06085Not Available-1163527 - 11638359496.93

Displaying genes 1 – 10 of 2136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

176 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002026acrylateC3H3O2Chemical structure of acrylate10344-93-1
Average71.056Da
Monoisotopic71.013852917Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da

Displaying 1–10 of 176 metabolites