Bacteroides sp. 4_1_36 strain TM07-1

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. 4_1_36 strain TM07-1 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain possesses a single replicon, indicative of its genetic organization. The accession number for this strain is QSOX00000000.1. As an anaerobe, Bacteroides sp. 4_1_36 strain TM07-1 thrives in environments devoid of oxygen, which is typical for many members of the Bacteroides genus. These bacteria are commonly found in the intestines of humans and other animals, playing a crucial role in the digestion of complex carbohydrates and maintaining gut health. The presence of flagella suggests that Bacteroides sp. 4_1_36 strain TM07-1 has the capability for motility, which may enhance its ability to colonize the gut environment effectively and interact with various substrates. This motility can contribute to its ecological role in the gastrointestinal microbiome, as it may allow the bacterium to navigate toward nutrient-rich areas or away from unfavorable conditions. Overall, the characteristics of Bacteroides sp. 4_1_36 strain TM07-1 highlight its adaptation to an anaerobic lifestyle and its potential importance in gut microbiota dynamics, where it contributes to the breakdown of complex carbohydrates and supports the overall health of the host.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. 4_1_36
Strainstrain TM07-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides sp. 4_1_36 strain TM07-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. 4_1_36 strain TM07-1 TM07-1.Scaf66, whole genome

Gene Summary

Adenine Count

1275174 bp

Thymine Count

1281005 bp

Guanine Count

1109873 bp

Cytosine Count

1110806 bp

Genome Length

4777078 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDXD65_11125Not AvailableNegative2609081 - 260979127723.2
carboxylating nicotinate-nucleotide diphosphorylaseDXD65_11130Not AvailableNegative2610018 - 261086631129.1
duf4783 domain-containing proteinDXD65_11135Not AvailableNegative2610859 - 261125114666.7
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDXD65_11140Not AvailablePositive2611346 - 261181918190.4
bifunctional fucokinase/l-fucose-1-p-guanylyltransferaseDXD65_11145Not AvailableNegative2611826 - 2614789110811.0
marr family transcriptional regulatorDXD65_11150Not AvailableNegative2615159 - 261551513304.3
pyridine nucleotide-disulfide oxidoreductaseDXD65_11155Not AvailableNegative2615527 - 261800189136.2
peptidase c11DXD65_11160Not AvailableNegative2618180 - 261936143890.4
hypothetical proteinDXD65_11165Not AvailableNegative2619378 - 261977615391.8
rna polymerase sigma factor rpod/sigaDXD65_11170Not AvailableNegative2619890 - 262075032775.3

Displaying genes 2181 – 2190 of 4057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.