Bacteroides sp. 4_1_36 strain TM07-1

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. 4_1_36 strain TM07-1 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain possesses a single replicon, indicative of its genetic organization. The accession number for this strain is QSOX00000000.1. As an anaerobe, Bacteroides sp. 4_1_36 strain TM07-1 thrives in environments devoid of oxygen, which is typical for many members of the Bacteroides genus. These bacteria are commonly found in the intestines of humans and other animals, playing a crucial role in the digestion of complex carbohydrates and maintaining gut health. The presence of flagella suggests that Bacteroides sp. 4_1_36 strain TM07-1 has the capability for motility, which may enhance its ability to colonize the gut environment effectively and interact with various substrates. This motility can contribute to its ecological role in the gastrointestinal microbiome, as it may allow the bacterium to navigate toward nutrient-rich areas or away from unfavorable conditions. Overall, the characteristics of Bacteroides sp. 4_1_36 strain TM07-1 highlight its adaptation to an anaerobic lifestyle and its potential importance in gut microbiota dynamics, where it contributes to the breakdown of complex carbohydrates and supports the overall health of the host.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. 4_1_36
Strainstrain TM07-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides sp. 4_1_36 strain TM07-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. 4_1_36 strain TM07-1 TM07-1.Scaf66, whole genome

Gene Summary

Adenine Count

1275174 bp

Thymine Count

1281005 bp

Guanine Count

1109873 bp

Cytosine Count

1110806 bp

Genome Length

4777078 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii crispr-associated endonuclease cas1DXD65_11025Not AvailableNegative2583146 - 258407534466.4
phage antirepressor proteinDXD65_11030Not AvailableNegative2584372 - 25845366384.63
type ii crispr rna-guided endonuclease cas9DXD65_11035Not AvailableNegative2584538 - 2588821165728.0
dna-binding proteinDXD65_11040Not AvailablePositive2589314 - 258995224505.3
nad(+) diphosphataseDXD65_11045Not AvailablePositive2590071 - 259087730577.4
phospho-sugar mutaseDXD65_11050Not AvailableNegative2591168 - 259291064380.0
dipeptidaseDXD65_11055Not AvailableNegative2592992 - 259463561763.2
m23 family peptidaseDXD65_11060Not AvailableNegative2594672 - 259635462923.1
alanine dehydrogenaseDXD65_11065Not AvailablePositive2596538 - 259764439265.1
mfs transporterDXD65_11070Not AvailableNegative2597721 - 259894444866.1

Displaying genes 2161 – 2170 of 4057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.