Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | DW921_04955 | Not Available | Negative | 1097647 - 1098990 | 49560.4 |
| polyprenol monophosphomannose synthase | DW921_04960 | Not Available | Negative | 1098996 - 1099745 | 29022.2 |
| nadh-quinone oxidoreductase subunit n | DW921_04965 | Not Available | Negative | 1099903 - 1101348 | 52066.7 |
| nadh-quinone oxidoreductase subunit m | DW921_04970 | Not Available | Negative | 1101355 - 1102839 | 53803.8 |
| nadh-quinone oxidoreductase subunit l | DW921_04975 | Not Available | Negative | 1102836 - 1104728 | 70197.6 |
| nadh-quinone oxidoreductase subunit nuok | DW921_04980 | Not Available | Negative | 1104748 - 1105065 | 11881.8 |
| nadh-quinone oxidoreductase subunit j | DW921_04985 | Not Available | Negative | 1105078 - 1105593 | 18432.6 |
| nadh-quinone oxidoreductase subunit i | DW921_04990 | Not Available | Negative | 1105606 - 1106073 | 17683.3 |
| nadh-quinone oxidoreductase subunit nuoh | DW921_04995 | Not Available | Negative | 1106107 - 1107198 | 40137.4 |
| nadh-quinone oxidoreductase subunit d | DW921_05000 | Not Available | Negative | 1107235 - 1108857 | 61615.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


