Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_04905 | Not Available | Positive | 1085845 - 1086162 | 11996.1 |
| s46 family peptidase | DW921_04910 | Not Available | Negative | 1086428 - 1088593 | 81899.5 |
| s46 family peptidase | DW921_04915 | Not Available | Negative | 1088597 - 1090762 | 81231.7 |
| duf4221 domain-containing protein | DW921_04920 | Not Available | Negative | 1090908 - 1092059 | 44359.9 |
| duf4221 domain-containing protein | DW921_04925 | Not Available | Negative | 1092123 - 1093220 | 42653.9 |
| hypothetical protein | DW921_04930 | Not Available | Negative | 1093404 - 1093826 | 15832.8 |
| duf4369 domain-containing protein | DW921_04935 | Not Available | Positive | 1094058 - 1094747 | 26125.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DW921_04940 | Not Available | Negative | 1094801 - 1095532 | 27813.4 |
| metallophosphoesterase | DW921_04945 | Not Available | Negative | 1095529 - 1096713 | 44733.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DW921_04950 | Not Available | Negative | 1096723 - 1097622 | 34120.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


