Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_04750 | Not Available | Positive | 1048926 - 1049132 | 7561.87 |
| viral a-type inclusion protein | DW921_04755 | Not Available | Positive | 1049129 - 1052776 | 135628.0 |
| hypothetical protein | DW921_04760 | Not Available | Positive | 1052778 - 1053242 | 17756.5 |
| hypothetical protein | DW921_04770 | Not Available | Positive | 1057257 - 1057544 | 10843.8 |
| hypothetical protein | DW921_04775 | Not Available | Positive | 1057541 - 1058260 | 25059.4 |
| mfs transporter | DW921_04780 | Not Available | Positive | 1058263 - 1058451 | 6600.75 |
| hypothetical protein | DW921_04785 | Not Available | Positive | 1058477 - 1065028 | 242432.0 |
| hypothetical protein | DW921_04790 | Not Available | Positive | 1065158 - 1065391 | 8550.72 |
| hypothetical protein | DW921_04795 | Not Available | Positive | 1065767 - 1067068 | 50873.1 |
| hypothetical protein | DW921_04800 | Not Available | Positive | 1067065 - 1067550 | 18643.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


