Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_04700 | Not Available | Negative | 1041709 - 1043241 | 59112.7 |
| helix-turn-helix domain-containing protein | DW921_04705 | Not Available | Negative | 1043253 - 1043696 | 16567.8 |
| clp protease clpp | DW921_04710 | Not Available | Positive | 1043834 - 1044940 | 41614.1 |
| hypothetical protein | DW921_04715 | Not Available | Positive | 1044948 - 1046147 | 43962.2 |
| lysozyme | DW921_04720 | Not Available | Positive | 1046154 - 1046618 | 17234.4 |
| hypothetical protein | DW921_04725 | Not Available | Positive | 1046634 - 1047023 | 13945.4 |
| hypothetical protein | DW921_04730 | Not Available | Positive | 1047052 - 1047531 | 17081.1 |
| hypothetical protein | DW921_04735 | Not Available | Positive | 1047548 - 1047823 | 10102.1 |
| hypothetical protein | DW921_04740 | Not Available | Positive | 1047820 - 1048395 | 20557.5 |
| hypothetical protein | DW921_04745 | Not Available | Positive | 1048399 - 1048887 | 18750.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


