Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_04650 | Not Available | Positive | 1035572 - 1035757 | 7140.02 |
| hypothetical protein | DW921_04655 | Not Available | Positive | 1035744 - 1035941 | 7552.23 |
| duf3164 family protein | DW921_04660 | Not Available | Positive | 1035960 - 1036622 | 26025.8 |
| transposase | DW921_04665 | Not Available | Positive | 1036733 - 1037002 | 10777.2 |
| hypothetical protein | DW921_04670 | Not Available | Negative | 1036985 - 1037446 | 17456.4 |
| hypothetical protein | DW921_04675 | Not Available | Negative | 1037451 - 1038080 | 24541.0 |
| hypothetical protein | DW921_04680 | Not Available | Positive | 1038143 - 1038391 | 9270.71 |
| hypothetical protein | DW921_04685 | Not Available | Negative | 1038353 - 1039858 | 57699.1 |
| duf935 family protein | DW921_04690 | Not Available | Negative | 1039897 - 1041249 | 51414.8 |
| duf1320 domain-containing protein | DW921_04695 | Not Available | Negative | 1041262 - 1041687 | 16566.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


