Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m24 family protein | DW921_04500 | Not Available | Negative | 1013562 - 1014953 | 51715.7 |
| patatin family protein | DW921_04505 | Not Available | Positive | 1015078 - 1015938 | 33200.6 |
| ribonuclease y | DW921_04510 | Not Available | Negative | 1016087 - 1017622 | 57404.6 |
| cell division protein zapa | DW921_04515 | Not Available | Negative | 1017728 - 1018033 | 12214.6 |
| hypothetical protein | DW921_04520 | Not Available | Negative | 1018062 - 1018355 | 11550.0 |
| 6-carboxytetrahydropterin synthase | DW921_04525 | Not Available | Positive | 1018502 - 1018834 | 12706.2 |
| radical sam protein | DW921_04530 | Not Available | Positive | 1018821 - 1019366 | 20218.2 |
| Trna-trp | Not Available | Not Available | Positive | 1019525 - 1019600 | Not Available |
| uracil-dna glycosylase family protein | DW921_04540 | Not Available | Negative | 1019674 - 1020270 | 22891.8 |
| hypothetical protein | DW921_04545 | Not Available | Negative | 1020357 - 1020986 | 24416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


