Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4827 domain-containing protein | DW921_04085 | Not Available | Positive | 913901 - 914563 | 25074.5 |
| phosphoglucosamine mutase | DW921_04090 | Not Available | Positive | 914575 - 915963 | 50399.4 |
| hypothetical protein | DW921_04095 | Not Available | Negative | 916078 - 916479 | 15018.4 |
| hypothetical protein | DW921_04100 | Not Available | Negative | 916586 - 917593 | 39387.0 |
| hypothetical protein | DW921_04105 | Not Available | Positive | 917840 - 918076 | 8826.72 |
| hypothetical protein | DW921_04110 | Not Available | Positive | 918263 - 918535 | 9571.6 |
| hypothetical protein | DW921_04115 | Not Available | Positive | 918611 - 919654 | 39756.6 |
| coproporphyrinogen iii oxidase family protein | DW921_04120 | Not Available | Negative | 919666 - 920796 | 43846.8 |
| elongation factor g | DW921_04125 | Not Available | Positive | 921044 - 923203 | 80726.6 |
| sensor histidine kinase | DW921_04130 | Not Available | Positive | 923467 - 925023 | 59802.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


