Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_03915 | Not Available | Negative | 866846 - 867631 | 30726.3 |
| tonb-dependent receptor | DW921_03920 | Not Available | Negative | 867879 - 870209 | 87711.9 |
| dna-binding response regulator | DW921_03925 | Not Available | Negative | 870683 - 871381 | 25985.2 |
| hypothetical protein | DW921_03930 | Not Available | Negative | 871475 - 872974 | 57439.9 |
| hypothetical protein | DW921_03935 | Not Available | Negative | 872961 - 873476 | 19574.3 |
| sensor histidine kinase | DW921_03940 | Not Available | Negative | 873495 - 874817 | 50645.6 |
| hypothetical protein | DW921_03945 | Not Available | Positive | 874992 - 875594 | 22979.6 |
| duf3836 domain-containing protein | DW921_03950 | Not Available | Positive | 875761 - 876021 | 9766.56 |
| hypothetical protein | DW921_03955 | Not Available | Negative | 876690 - 877094 | 15866.5 |
| Trna-ile | Not Available | Not Available | Positive | 878762 - 878838 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


