Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW921_03660 | Not Available | Positive | 802646 - 803521 | 30762.1 |
| sdr family nad(p)-dependent oxidoreductase | DW921_03670 | Not Available | Positive | 804574 - 805350 | 28348.6 |
| arac family transcriptional regulator | DW921_03675 | Not Available | Negative | 805367 - 806245 | 33511.6 |
| cytidylate kinase family protein | DW921_03680 | Not Available | Positive | 806378 - 807688 | 49555.2 |
| 6-bladed beta-propeller | DW921_03685 | Not Available | Negative | 807778 - 808968 | 44768.4 |
| duf4981 domain-containing protein | DW921_03690 | Not Available | Negative | 809222 - 813193 | 150269.0 |
| 6-bladed beta-propeller | DW921_03695 | Not Available | Negative | 813511 - 814734 | 46521.3 |
| 6-bladed beta-propeller | DW921_03700 | Not Available | Negative | 814788 - 815927 | 43458.4 |
| hypothetical protein | DW921_03705 | Not Available | Negative | 816190 - 817854 | 65000.3 |
| hypothetical protein | DW921_03710 | Not Available | Negative | 817898 - 819616 | 65713.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


