Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_03560 | Not Available | Negative | 779022 - 781205 | 81504.6 |
| aminoglycoside phosphotransferase family protein | DW921_03565 | Not Available | Negative | 781675 - 782760 | 41044.3 |
| hypothetical protein | DW921_03570 | Not Available | Positive | 782785 - 782976 | 7453.3 |
| mfs transporter | DW921_03575 | Not Available | Positive | 782973 - 784514 | 57140.5 |
| mfs transporter | DW921_03580 | Not Available | Positive | 784604 - 786163 | 57207.1 |
| hypothetical protein | DW921_03585 | Not Available | Positive | 786366 - 786830 | 17001.6 |
| diguanylate cyclase | DW921_03590 | Not Available | Negative | 787002 - 787526 | 19242.2 |
| ketol-acid reductoisomerase | DW921_03595 | Not Available | Negative | 787684 - 788727 | 38550.9 |
| acyl-[acyl-carrier-protein] thioesterase | DW921_03600 | Not Available | Negative | 788780 - 789523 | 28749.3 |
| acetolactate synthase small subunit | DW921_03605 | Not Available | Negative | 789532 - 790083 | 21120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


