Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase subunit cobn | DW921_03460 | Not Available | Positive | 754345 - 758499 | 155823.0 |
| hypothetical protein | DW921_03465 | Not Available | Positive | 758515 - 759207 | 25623.5 |
| mota/tolq/exbb proton channel family protein | DW921_03470 | Not Available | Positive | 759233 - 759835 | 22462.9 |
| duf2149 domain-containing protein | DW921_03475 | Not Available | Positive | 759832 - 760161 | 12406.9 |
| hypothetical protein | DW921_03480 | Not Available | Negative | 760261 - 760503 | 9356.31 |
| hypothetical protein | DW921_03485 | Not Available | Negative | 760528 - 762840 | 89767.4 |
| rna methyltransferase | DW921_03490 | Not Available | Positive | 762947 - 763699 | 28027.8 |
| hypothetical protein | DW921_03495 | Not Available | Negative | 763724 - 764050 | 11990.5 |
| duf4296 domain-containing protein | DW921_03500 | Not Available | Negative | 764047 - 764964 | 34689.2 |
| lipoprotein signal peptidase | DW921_03505 | Not Available | Negative | 764978 - 765613 | 24040.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


