Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pega domain-containing protein | DW921_03245 | Not Available | Positive | 702074 - 703423 | 51248.8 |
| ribosome recycling factor | DW921_03250 | Not Available | Positive | 703442 - 704158 | 27398.0 |
| duf4280 domain-containing protein | DW921_03255 | Not Available | Negative | 704396 - 704785 | 13553.2 |
| hypothetical protein | DW921_03260 | Not Available | Negative | 704799 - 706589 | 64377.7 |
| hypothetical protein | DW921_03265 | Not Available | Negative | 706609 - 710334 | 141463.0 |
| hypothetical protein | DW921_03270 | Not Available | Negative | 710359 - 710805 | 17040.2 |
| hypothetical protein | DW921_03275 | Not Available | Negative | 710896 - 711279 | 14659.3 |
| hypothetical protein | DW921_03280 | Not Available | Negative | 711406 - 711834 | 16501.6 |
| hypothetical protein | DW921_03285 | Not Available | Negative | 711844 - 712236 | 15017.0 |
| type vi secretion system contractile sheath protein tssc | DW921_03290 | Not Available | Negative | 712281 - 713651 | 51263.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


