Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_03195 | Not Available | Negative | 690868 - 693300 | 93526.1 |
| hypothetical protein | DW921_03200 | Not Available | Negative | 693332 - 694123 | 30862.9 |
| hypothetical protein | DW921_03205 | Not Available | Negative | 694180 - 695328 | 44346.6 |
| hypothetical protein | DW921_03210 | Not Available | Negative | 695409 - 695840 | 16854.0 |
| hypothetical protein | DW921_03215 | Not Available | Negative | 696031 - 696348 | 11994.3 |
| hypothetical protein | DW921_03220 | Not Available | Negative | 696434 - 698131 | 65038.2 |
| hypothetical protein | DW921_03225 | Not Available | Negative | 698176 - 698622 | 16660.8 |
| hypothetical protein | DW921_03230 | Not Available | Negative | 698633 - 699772 | 43994.3 |
| hypothetical protein | DW921_03235 | Not Available | Negative | 699769 - 700599 | 32462.6 |
| thif family adenylyltransferase | DW921_03240 | Not Available | Negative | 700596 - 701828 | 46037.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


