Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DW921_14775 | Not Available | Negative | 3429966 - 3430610 | 23974.9 |
| l-serine ammonia-lyase | DW921_14780 | Not Available | Negative | 3430639 - 3431847 | 43542.8 |
| endonuclease muts2 | DW921_14785 | Not Available | Negative | 3431931 - 3434435 | 95133.2 |
| Trna-ser | Not Available | Not Available | Positive | 3434599 - 3434686 | Not Available |
| k(+)-transporting atpase subunit c | DW921_14800 | Not Available | Negative | 3435607 - 3436194 | 21359.8 |
| k(+)-transporting atpase subunit b | DW921_14805 | Not Available | Negative | 3436213 - 3438249 | 72870.4 |
| potassium-transporting atpase subunit kdpa | DW921_14810 | Not Available | Negative | 3438344 - 3440050 | 61851.4 |
| potassium-transporting atpase subunit f | DW921_14815 | Not Available | Negative | 3440104 - 3440184 | 3146.15 |
| hypothetical protein | DW921_14825 | Not Available | Positive | 3442210 - 3442953 | 28646.0 |
| hypothetical protein | DW921_14830 | Not Available | Positive | 3442955 - 3443695 | 28928.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


