Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_14255 | Not Available | Positive | 3310541 - 3311029 | 18403.7 |
| conjugative transposon protein tram | DW921_14260 | Not Available | Positive | 3311026 - 3312237 | 45442.1 |
| conjugative transposon protein tran | DW921_14265 | Not Available | Positive | 3312282 - 3313172 | 34197.9 |
| hypothetical protein | DW921_14270 | Not Available | Positive | 3313176 - 3313649 | 17845.7 |
| blai/meci/copy family transcriptional regulator | DW921_14280 | Not Available | Positive | 3316465 - 3316827 | 14062.7 |
| tonb family protein | DW921_14285 | Not Available | Positive | 3316861 - 3318651 | 66458.9 |
| tlpa family protein disulfide reductase | DW921_14295 | Not Available | Positive | 3321016 - 3322176 | 45006.1 |
| 6-bladed beta-propeller | DW921_14300 | Not Available | Negative | 3322178 - 3323323 | 44139.7 |
| alpha/beta hydrolase | DW921_14305 | Not Available | Negative | 3323387 - 3324628 | 44498.4 |
| iron-containing alcohol dehydrogenase | DW921_14310 | Not Available | Negative | 3324738 - 3325907 | 42438.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


