Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DW921_13400 | Not Available | Positive | 3124533 - 3124874 | 13400.4 |
| phosphatase pap2 family protein | DW921_13405 | Not Available | Negative | 3124987 - 3125961 | 37276.0 |
| nad(p)-dependent oxidoreductase | DW921_13410 | Not Available | Negative | 3125952 - 3126962 | 38875.0 |
| ribonuclease r | DW921_13415 | Not Available | Positive | 3127203 - 3129353 | 82082.7 |
| serine acetyltransferase | DW921_13420 | Not Available | Positive | 3129636 - 3130535 | 32812.4 |
| arylsulfatase | DW921_13425 | Not Available | Negative | 3130641 - 3132119 | 54741.4 |
| acetylhydrolase | DW921_13430 | Not Available | Negative | 3132463 - 3133557 | 41113.4 |
| alkaline phosphatase | DW921_13435 | Not Available | Negative | 3133570 - 3134499 | 34024.8 |
| hypothetical protein | DW921_13440 | Not Available | Negative | 3134596 - 3135633 | 39868.1 |
| serine--trna ligase | DW921_13450 | Not Available | Negative | 3136499 - 3137776 | 47850.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


