Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3070938 - 3071015 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3071048 - 3071122 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3071513 - 3071585 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3071603 - 3071678 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3071696 - 3071771 | Not Available |
| hypothetical protein | DW921_13120 | Not Available | Negative | 3072067 - 3072486 | 16579.1 |
| hypothetical protein | DW921_13125 | Not Available | Negative | 3072567 - 3072992 | 15883.5 |
| hypothetical protein | DW921_13130 | Not Available | Negative | 3073230 - 3073757 | 18701.1 |
| hypothetical protein | DW921_13135 | Not Available | Negative | 3073967 - 3075127 | 46242.8 |
| hypothetical protein | DW921_13140 | Not Available | Negative | 3075143 - 3075349 | 8270.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


