Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_12775 | Not Available | Positive | 2991156 - 2992394 | 47629.6 |
| type iii restriction endonuclease subunit r | DW921_12780 | Not Available | Positive | 2992504 - 2994861 | 90832.2 |
| hypothetical protein | DW921_12785 | Not Available | Positive | 2994868 - 2995086 | 8325.99 |
| dna sulfur modification protein dndd | DW921_12790 | Not Available | Positive | 2995101 - 2997101 | 76029.0 |
| duf87 domain-containing protein | DW921_12795 | Not Available | Positive | 2997107 - 2998693 | 59425.8 |
| hypothetical protein | DW921_12800 | Not Available | Positive | 2998765 - 3000894 | 82615.0 |
| hypothetical protein | DW921_12810 | Not Available | Positive | 3002297 - 3002548 | 9531.57 |
| hypothetical protein | DW921_12820 | Not Available | Negative | 3004655 - 3005260 | 23339.0 |
| ahpc/tsa family protein | DW921_12825 | Not Available | Positive | 3005331 - 3006791 | 55552.3 |
| 6-bladed beta-propeller | DW921_12830 | Not Available | Negative | 3006799 - 3008115 | 50427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


