Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_12720 | Not Available | Negative | 2980080 - 2980439 | 13743.4 |
| hypothetical protein | DW921_12725 | Not Available | Positive | 2980502 - 2980789 | 11386.8 |
| hypothetical protein | DW921_12730 | Not Available | Negative | 2980829 - 2981014 | 7279.96 |
| hypothetical protein | DW921_12735 | Not Available | Positive | 2981086 - 2981907 | 31540.6 |
| is1595 family transposase | DW921_12740 | Not Available | Negative | 2982082 - 2982999 | 35611.8 |
| hypothetical protein | DW921_12750 | Not Available | Negative | 2983938 - 2984996 | 41548.5 |
| hypothetical protein | DW921_12755 | Not Available | Negative | 2984983 - 2986926 | 76529.2 |
| nucleotidyl transferase abieii/abigii toxin family protein | DW921_12760 | Not Available | Negative | 2987494 - 2988321 | 32463.1 |
| hypothetical protein | DW921_12765 | Not Available | Negative | 2988318 - 2988944 | 23940.1 |
| atp-binding protein | DW921_12770 | Not Available | Negative | 2989422 - 2990630 | 46085.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


