Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_12620 | Not Available | Positive | 2962557 - 2963600 | 38938.4 |
| transcriptional regulator | DW921_12625 | Not Available | Negative | 2963911 - 2964195 | 10411.7 |
| hypothetical protein | DW921_12630 | Not Available | Negative | 2964180 - 2964806 | 24228.1 |
| hypothetical protein | DW921_12635 | Not Available | Negative | 2964889 - 2965116 | 8927.06 |
| cytochrome b6 | DW921_12640 | Not Available | Negative | 2965345 - 2966733 | 50943.6 |
| cytochrome c assembly protein | DW921_12645 | Not Available | Negative | 2966782 - 2967564 | 30147.2 |
| hypothetical protein | DW921_12650 | Not Available | Positive | 2967688 - 2968041 | 13460.3 |
| ghkl domain-containing protein | DW921_12655 | Not Available | Positive | 2968046 - 2969119 | 41808.1 |
| duf3945 domain-containing protein | DW921_12660 | Not Available | Positive | 2969759 - 2971576 | 68828.5 |
| duf4099 domain-containing protein | DW921_12665 | Not Available | Positive | 2971631 - 2971891 | 9571.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


