Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_12520 | Not Available | Negative | 2949427 - 2949633 | 7482.76 |
| Trna-gly | Not Available | Not Available | Positive | 2949745 - 2949817 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2949826 - 2949909 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2949948 - 2950023 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2950032 - 2950115 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2950154 - 2950229 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2950284 - 2950367 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2950406 - 2950481 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2950491 - 2950575 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2950595 - 2950675 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


