Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DW921_12155 | Not Available | Positive | 2869829 - 2871325 | 58083.1 |
| hypothetical protein | DW921_12160 | Not Available | Negative | 2871418 - 2871630 | 8345.17 |
| hypothetical protein | DW921_12165 | Not Available | Positive | 2872504 - 2872890 | 14788.8 |
| mobilization protein | DW921_12170 | Not Available | Positive | 2873009 - 2874574 | 60824.6 |
| hypothetical protein | DW921_12175 | Not Available | Negative | 2874636 - 2875931 | 49387.6 |
| hypothetical protein | DW921_12180 | Not Available | Negative | 2875921 - 2876682 | 29269.8 |
| amidinotransferase | DW921_12185 | Not Available | Negative | 2876645 - 2877550 | 34969.0 |
| hypothetical protein | DW921_12190 | Not Available | Negative | 2877547 - 2879496 | 75386.1 |
| chromosome partitioning protein para | DW921_12195 | Not Available | Positive | 2879901 - 2880725 | 31081.7 |
| hypothetical protein | DW921_12200 | Not Available | Positive | 2880753 - 2881151 | 15164.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


