Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh peroxidase | DW921_11995 | Not Available | Negative | 2838023 - 2838574 | 20795.7 |
| transcriptional repressor | DW921_12000 | Not Available | Negative | 2838624 - 2839040 | 15961.3 |
| nad(+) synthase | DW921_12005 | Not Available | Positive | 2839312 - 2841243 | 71243.0 |
| nad(+) diphosphatase | DW921_12010 | Not Available | Negative | 2841244 - 2842029 | 29479.5 |
| rna-binding transcriptional accessory protein | DW921_12015 | Not Available | Negative | 2842062 - 2844194 | 79713.5 |
| n-acetyltransferase | DW921_12020 | Not Available | Negative | 2844246 - 2844734 | 18150.6 |
| hypothetical protein | DW921_12025 | Not Available | Negative | 2844978 - 2845268 | 11430.7 |
| j domain-containing protein | DW921_12030 | Not Available | Negative | 2845287 - 2846225 | 34507.1 |
| bifunctional metallophosphatase/5'-nucleotidase | DW921_12035 | Not Available | Positive | 2846382 - 2848109 | 65014.0 |
| hypothetical protein | DW921_12040 | Not Available | Positive | 2848254 - 2848487 | 8564.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


