Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DW921_11840 | Not Available | Negative | 2804717 - 2805688 | 38457.2 |
| hypothetical protein | DW921_11845 | Not Available | Negative | 2805703 - 2806575 | 33561.1 |
| glycosyltransferase family 2 protein | DW921_11850 | Not Available | Negative | 2806597 - 2807511 | 35673.4 |
| hypothetical protein | DW921_11855 | Not Available | Negative | 2807516 - 2808391 | 33260.7 |
| cggc domain-containing protein | DW921_11860 | Not Available | Negative | 2808768 - 2809130 | 13279.2 |
| arac family transcriptional regulator | DW921_11865 | Not Available | Positive | 2809693 - 2810193 | 19278.7 |
| cupin domain-containing protein | DW921_11870 | Not Available | Negative | 2810203 - 2810652 | 16266.3 |
| mbl fold metallo-hydrolase | DW921_11875 | Not Available | Negative | 2810756 - 2811532 | 29115.0 |
| nad-dependent protein deacetylase | DW921_11880 | Not Available | Positive | 2812136 - 2813038 | 35043.1 |
| hypothetical protein | DW921_11885 | Not Available | Positive | 2813040 - 2813723 | 25907.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


