Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | DW921_11790 | Not Available | Negative | 2794562 - 2795698 | 44140.6 |
| acyltransferase | DW921_11795 | Not Available | Negative | 2795735 - 2796343 | 22063.3 |
| hypothetical protein | DW921_11800 | Not Available | Negative | 2796327 - 2797646 | 50003.6 |
| glycosyltransferase family 2 protein | DW921_11805 | Not Available | Negative | 2797682 - 2798662 | 38554.4 |
| alpha-1,2-fucosyltransferase | DW921_11810 | Not Available | Negative | 2798678 - 2799550 | 33832.3 |
| glycosyltransferase family 8 protein | DW921_11815 | Not Available | Negative | 2799564 - 2800502 | 37511.6 |
| hypothetical protein | DW921_11820 | Not Available | Negative | 2800505 - 2801434 | 37044.9 |
| glycosyltransferase | DW921_11825 | Not Available | Negative | 2801438 - 2802397 | 37381.4 |
| polysaccharide pyruvyl transferase | DW921_11830 | Not Available | Negative | 2802411 - 2803364 | 37835.8 |
| glycosyltransferase family 2 protein | DW921_11835 | Not Available | Negative | 2803707 - 2804720 | 39784.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


