Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_11740 | Not Available | Negative | 2781975 - 2784419 | 89734.0 |
| chromosome partitioning protein para | DW921_11745 | Not Available | Negative | 2784706 - 2787057 | 88984.3 |
| polysaccharide export protein | DW921_11750 | Not Available | Negative | 2787081 - 2787872 | 29403.3 |
| phosphoenolpyruvate carboxykinase | DW921_11755 | Not Available | Negative | 2787882 - 2788778 | 33128.3 |
| hypothetical protein | DW921_11760 | Not Available | Negative | 2788775 - 2789887 | 42744.4 |
| pqqd family protein | DW921_11765 | Not Available | Negative | 2789860 - 2790126 | 10272.3 |
| sugar transferase | DW921_11770 | Not Available | Negative | 2790169 - 2790795 | 24196.1 |
| glycosyltransferase | DW921_11775 | Not Available | Negative | 2790837 - 2791958 | 42139.6 |
| hypothetical protein | DW921_11780 | Not Available | Negative | 2791986 - 2793167 | 45851.4 |
| glycosyltransferase | DW921_11785 | Not Available | Negative | 2793312 - 2794595 | 49334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


