Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_11690 | Not Available | Positive | 2768511 - 2769134 | 24491.8 |
| hypothetical protein | DW921_11695 | Not Available | Positive | 2769147 - 2769590 | 16528.0 |
| glycoside hydrolase family 2 | DW921_11700 | Not Available | Positive | 2769665 - 2773039 | 127289.0 |
| sodium/glucose cotransporter | DW921_11705 | Not Available | Positive | 2773049 - 2774620 | 56982.5 |
| cobalamin-binding protein | DW921_11710 | Not Available | Positive | 2774639 - 2775307 | 24331.8 |
| methylcobamide--com methyltransferase | DW921_11715 | Not Available | Positive | 2775339 - 2776334 | 35921.2 |
| abc transporter atp-binding protein | DW921_11720 | Not Available | Negative | 2776342 - 2778006 | 62049.9 |
| hypothetical protein | DW921_11725 | Not Available | Negative | 2777999 - 2778502 | 19598.3 |
| cell envelope biogenesis protein ompa | DW921_11730 | Not Available | Negative | 2778572 - 2779768 | 44203.3 |
| hypothetical protein | DW921_11735 | Not Available | Negative | 2779803 - 2781896 | 75823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


