Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin | DW921_11485 | Not Available | Positive | 2719833 - 2720318 | 18424.8 |
| hypothetical protein | DW921_11490 | Not Available | Positive | 2720349 - 2721029 | 26784.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DW921_11495 | Not Available | Positive | 2721040 - 2721606 | 21234.6 |
| duf2795 domain-containing protein | DW921_11500 | Not Available | Positive | 2721669 - 2721890 | 8716.91 |
| recombinase | DW921_11505 | Not Available | Positive | 2722092 - 2723450 | 52383.0 |
| hypothetical protein | DW921_11510 | Not Available | Positive | 2723503 - 2724183 | 25312.9 |
| dna-binding protein | DW921_11515 | Not Available | Positive | 2724444 - 2724773 | 12959.6 |
| duf3987 domain-containing protein | DW921_11520 | Not Available | Positive | 2724766 - 2726265 | 57240.6 |
| hypothetical protein | DW921_11525 | Not Available | Positive | 2726258 - 2727286 | 38861.6 |
| recombinase | DW921_11530 | Not Available | Positive | 2727437 - 2728990 | 59794.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


