Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein | DW921_10820 | Not Available | Negative | 2541095 - 2541556 | 17955.9 |
| duf1282 domain-containing protein | DW921_10825 | Not Available | Negative | 2541556 - 2542125 | 21374.7 |
| hypothetical protein | DW921_10830 | Not Available | Negative | 2542253 - 2543053 | 29316.3 |
| duf4375 domain-containing protein | DW921_10835 | Not Available | Negative | 2543153 - 2543665 | 19758.3 |
| hypothetical protein | DW921_10840 | Not Available | Positive | 2543950 - 2544651 | 25202.4 |
| gggtgrt protein | DW921_10845 | Not Available | Positive | 2544672 - 2545682 | 35923.1 |
| hypothetical protein | DW921_10850 | Not Available | Positive | 2546052 - 2546525 | 18236.9 |
| duf4221 domain-containing protein | DW921_10860 | Not Available | Positive | 2546698 - 2547858 | 45797.3 |
| hypothetical protein | DW921_10870 | Not Available | Negative | 2548290 - 2549102 | 30041.7 |
| peptidase | DW921_10875 | Not Available | Negative | 2549184 - 2549987 | 29396.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


