Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fpra family a-type flavoprotein | DW921_10095 | Not Available | Positive | 2369445 - 2370635 | 45062.3 |
| hypothetical protein | DW921_10100 | Not Available | Negative | 2370870 - 2371760 | 33389.2 |
| mechanosensitive ion channel family protein | DW921_10110 | Not Available | Negative | 2375211 - 2376068 | 31361.5 |
| threonylcarbamoyl-amp synthase | DW921_10115 | Not Available | Negative | 2376098 - 2376709 | 23188.0 |
| tetratricopeptide repeat protein | DW921_10120 | Not Available | Negative | 2376724 - 2378730 | 76030.9 |
| spfh domain-containing protein | DW921_10125 | Not Available | Positive | 2379394 - 2380335 | 34716.2 |
| arc family dna-binding protein | DW921_10130 | Not Available | Positive | 2380337 - 2380537 | 7490.01 |
| hypothetical protein | DW921_10135 | Not Available | Positive | 2380626 - 2381102 | 17686.5 |
| alpha-l-fucosidase | DW921_10140 | Not Available | Negative | 2381208 - 2383298 | 78792.2 |
| tryptophan-rich sensory protein | DW921_10145 | Not Available | Positive | 2383504 - 2383917 | 15888.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


