Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DW921_09740 | Not Available | Positive | 2283550 - 2284818 | 47244.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DW921_09745 | Not Available | Positive | 2284823 - 2286157 | 50065.8 |
| ftsw/roda/spove family cell cycle protein | DW921_09750 | Not Available | Positive | 2286168 - 2287499 | 48970.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DW921_09755 | Not Available | Positive | 2287559 - 2288689 | 41002.0 |
| udp-n-acetylmuramate--l-alanine ligase | DW921_09760 | Not Available | Positive | 2288679 - 2290055 | 51207.5 |
| cell division protein ftsq | DW921_09765 | Not Available | Positive | 2290052 - 2290789 | 27843.0 |
| cell division protein ftsa | DW921_09770 | Not Available | Positive | 2290793 - 2292364 | 59060.2 |
| cell division protein ftsz | DW921_09775 | Not Available | Positive | 2292410 - 2293717 | 47810.8 |
| gatb/yqey domain-containing protein | DW921_09780 | Not Available | Positive | 2293756 - 2294205 | 16121.6 |
| atp-binding cassette domain-containing protein | DW921_09785 | Not Available | Positive | 2294430 - 2295344 | 34431.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


