Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter | DW921_08850 | Not Available | Positive | 2051052 - 2051387 | 12667.2 |
| udp-glucose 6-dehydrogenase | DW921_08855 | Not Available | Positive | 2051410 - 2051567 | 5726.88 |
| acyltransferase | DW921_08860 | Not Available | Negative | 2051719 - 2052876 | 44225.7 |
| abc-f family atpase | DW921_08865 | Not Available | Negative | 2052962 - 2054581 | 61007.8 |
| nucleotide exchange factor grpe | DW921_08870 | Not Available | Positive | 2054851 - 2055432 | 21682.6 |
| molecular chaperone dnaj | DW921_08875 | Not Available | Positive | 2055440 - 2056612 | 41987.1 |
| hypothetical protein | DW921_08880 | Not Available | Positive | 2057190 - 2058251 | 39915.0 |
| 6-bladed beta-propeller | DW921_08885 | Not Available | Positive | 2058420 - 2059601 | 45384.9 |
| l-fucose isomerase | DW921_08890 | Not Available | Positive | 2059867 - 2061639 | 65297.6 |
| lactaldehyde reductase | DW921_08895 | Not Available | Positive | 2061661 - 2062815 | 41167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


